bean build-prior

Build custom prior for batch integration

This is a helper function that is used for batch integration when the library is split into two disjoint sublibraries. For the usage, see the batch integration tutorial.

Full parameters

Generate prior_param.pkl for two batched runs, where two runs have no overlap but where guides that targeting a single edit are present in both libraries.

usage: bean build-prior [-h] command1 command2 raw_run_output1 output_path

Positional Arguments

command1

bean run command for the first batched run.

command2

bean run command for the second batched run.

raw_run_output1

bean run output .pkl path for the first batched run, which should be ran with –save-raw

output_path

Output path to save prior parameters.