Installation#

Cell2net installation#

Prerequisites#

  • Python 3.8 or higher

  • CUDA-compatible GPU (recommended for model training)

  • At least 16GB RAM for large datasets

Install from GitHub (Latest Development Version)#

pip install git+https://github.com/pinellolab/cell2net.git

Install in Development Mode#

For contributors or users wanting to modify the source code:

git clone https://github.com/pinellolab/cell2net.git
cd cell2net
pip install -e .